
Bioinformatics: Sequence Alignment and Markov Models
1st EditionISBN10: 0071593063
ISBN13: 9780071593069
Copyright: 2009
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ISBN10: 0071593063 | ISBN13: 9780071593069
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The estimated amount of time this product will be on the market is based on a number of factors, including faculty input to instructional design and the prior revision cycle and updates to academic research-which typically results in a revision cycle ranging from every two to four years for this product. Pricing subject to change at any time.
The estimated amount of time this product will be on the market is based on a number of factors, including faculty input to instructional design and the prior revision cycle and updates to academic research-which typically results in a revision cycle ranging from every two to four years for this product. Pricing subject to change at any time.
Program Details
Acknowledgments
Chapter 1. Preliminaries
Part 1: Sequence Alignment and Representation
Chapter 2. Alignment of a Pair of Sequences
Chapter 3. Sequence Representation and String Algorithms
Chapter 4. Multiple-Sequence Alignment
Part 2: Probability Models
Chapter 5. Hidden Markov Models and Applications
Chapter 6. Gene Finding, Protein Secondary Structure
Part 3: Measurement Techniques
Chapter 7. Biochips
Chapter 8. Electrophoretic Techniques and Finite Speed of Diffusion
Appendix A. Internet Hotlinks to Public-Domain Databases
Appendix B. PERL for Bioinformaticists
Index
About the Author
Kal Sharma
Dr. Kal Renganathan Sharma PE (Prairie View, Texas) received his BTech in chemical engineering from Indian Institute of Technology, Chennai, India and MS and PhD in chemical engineering from West Virginia University, Morgantown. He spent two terms at the department of computer science at Dartmouth College and some time under Ramana Reddy, Director of Concurrent Engineering Research Center, West Virginia University, Morgantown. His postdoctoral research work was with R. Shankar Subramanian, formerly chair and professor, chemical engineering at Clarkson University. He performed some probabilistic modeling while he was at Monsanto Plastics. Dr. Sharma has authored 5 books, 10 journal articles, 440 conference papers, 53 preprints, 37 invited lectures/seminars, and 21 others. He developed the curriculum and syllabus for the M.Tech. in Bioinformatics program when he served as Professor and Head of Department at Vellore Engineering College, India. Dr. Sharma has held a number of other positions including: Principal, Sakthi Engineering College, Chennai, India; Professor, SASTRA University, Thanjavur, India; President, Independent Institute of Technology, Hanover, NH; Adjunct Assistant Professor, Mechanical & Aerospace Engineering, West Virginia University, Morgantown; Visiting Research Assistant Professor, Applied and Engineering Statistics, George Mason University, Fairfax. He has instructed more than 1500 students. Dr. Sharma is currently Adjunct Professor with the college of engineering at Prairie View A & M University.
Acknowledgments
Chapter 1. Preliminaries
Part 1: Sequence Alignment and Representation
Chapter 2. Alignment of a Pair of Sequences
Chapter 3. Sequence Representation and String Algorithms
Chapter 4. Multiple-Sequence Alignment
Part 2: Probability Models
Chapter 5. Hidden Markov Models and Applications
Chapter 6. Gene Finding, Protein Secondary Structure
Part 3: Measurement Techniques
Chapter 7. Biochips
Chapter 8. Electrophoretic Techniques and Finite Speed of Diffusion
Appendix A. Internet Hotlinks to Public-Domain Databases
Appendix B. PERL for Bioinformaticists
Index
About the Author
Kal Sharma
Dr. Kal Renganathan Sharma PE (Prairie View, Texas) received his BTech in chemical engineering from Indian Institute of Technology, Chennai, India and MS and PhD in chemical engineering from West Virginia University, Morgantown. He spent two terms at the department of computer science at Dartmouth College and some time under Ramana Reddy, Director of Concurrent Engineering Research Center, West Virginia University, Morgantown. His postdoctoral research work was with R. Shankar Subramanian, formerly chair and professor, chemical engineering at Clarkson University. He performed some probabilistic modeling while he was at Monsanto Plastics. Dr. Sharma has authored 5 books, 10 journal articles, 440 conference papers, 53 preprints, 37 invited lectures/seminars, and 21 others. He developed the curriculum and syllabus for the M.Tech. in Bioinformatics program when he served as Professor and Head of Department at Vellore Engineering College, India. Dr. Sharma has held a number of other positions including: Principal, Sakthi Engineering College, Chennai, India; Professor, SASTRA University, Thanjavur, India; President, Independent Institute of Technology, Hanover, NH; Adjunct Assistant Professor, Mechanical & Aerospace Engineering, West Virginia University, Morgantown; Visiting Research Assistant Professor, Applied and Engineering Statistics, George Mason University, Fairfax. He has instructed more than 1500 students. Dr. Sharma is currently Adjunct Professor with the college of engineering at Prairie View A & M University.
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